Yang, Jiue-in Associate Professor Nematology and Microbial Ecology Laboratory

◆ Microbiome/ Phytobiome
◆ Biological control of plant pests
◆ Molecular detection assay development
◆ Adaptation and pathogenic behavior of plant nematodes

Jen Yan Fan
Research Assistant

fanjenyan@gmail.com

Meng Shan Hsieh
Research Assistant

r07633006@ntu.edu.tw

盧芃君
M.S. Student

r08633020@ntu.edu.tw

黃紹綺
M.S. Student

郭浩宇
M.S. Student

r10633001@ntu.edu.tw

鄭凱文
M.S. Student

r10633002@ntu.edu.tw
Ph. D. University of California, Riverside
B.S. National Taiwan University
◆ Plant nematology and laboratory
◆ Current topics of nematology
◆ Tropical plant pathology
◆ Bioagents and bioproducts for agricultural use
◆ Plant diseases and diagnosis
◆ Plant disease diagnosis
◆ Practice in plant disease and insect control
◆ Introduction to plant pathology and microbiology
◆ Plant quarantine
Year Article
2022

Fungi Associated with the Potato Taste Defect in Coffee Beans from Rwanda

Botanical Studies

vol.63,page.17

Amanda R. Hale, Paul M. Ruegger, Philippe Rolshausen, James Borneman, Jiue-in Yang

2021

Copy Number Quantification for the Soybean Cyst Nematode Resistance Locus rhg1 in the Soybean Varieties of Taiwan

Agronomy

vol.11,no.7,page.1346

Cheng-Chun Huang, Jiue-in Yang, Kuo-Lung Chou, Chen-Hsiang Lin and Hao-Xun Chang

2021

Hyalorbilia oviparasitica Clade Detected in Field Soils Cropped to Sugar Beets and Enriched in the Presence of Heterodera schachtii and a Host Crop

Phytofrontiers

vol.1,no.1,page.13-20

Hannes Witte*, Jiue-in Yang*, Geoffrey D. Logan, Nicole B. Colindres, Beth B. Peacock, Jennifer Smith Becker, Paul M. Ruegger, J. Ole Becker, and James Borneman

2020

The Screening of Resistance against Meloidogyne graminicola in Oats

Agriculture

vol.10,page.325

Shun-Min Yao, Yung-Fen Huang, Jiue-in Yang

2020

The Evaluation of Egg-Parasitic Fungi Paraboeremia taiwanensis and Samsoniella sp. for the Biological Control of Meloidogyne enterolobii on Chinese Cabbage

Microorganisms

vol.8,page.828

Yu-Jie Liang , Hiran A. Ariyawansa, J. Ole Becker and Jiue-in Yang

2020

A global database of soil nematode abundance and functional group composition

Scientific Data

vol.7,no.103

Johan van den Hoogen, Stefan Geisen, ..., Jiue-in Yang, ..., and Thomas W. Crowther

2020

In vitro inferred interactions of selected entomopathogenic fungi from Taiwan and eggs of Meloidogyne graminicola

Mycological Progress

vol.19,page.97-109

Jiue-in Yang, Marc Stadler, Wei-Yu Chuang, Shipher Wu and Hiran A. Ariyawansa

2019

The morphological and molecular characteristics of Pratylenchus vulnus Taiwan strawberry isolate.

Journal of Nematology

vol.51,page.1-5

Yu-Po Lin, Wan-chun Lee, Pei-che Chung and Jiue-in Yang

2019

A loop-mediated isothermal amplification assay for the plant-parasitic nematode Aphelenchoides besseyi in rice seedling

Journal of Nematology

vol.51,page.1-11

Jiue-in Yang and Guan-Yi Yu

2019

恆溫圈環形核酸增幅偵測技術於水稻徒長病篩檢之適用性探討

植物醫學期刊

vol.61,no.4,page.11-19

李婉均余冠毅、陳思聿、 梁瑀婕、鍾嘉綾、 楊爵因

2019

Soil nematode abundance and functional group composition at a global scale

Nature

vol.572,page.194–198

Johan van den Hoogen, Stefan Geisen, ..., Jiue-in Yang , and Thomas Ward Crowther

2019

Assessment of Pierce’s disease susceptibility in Vitis vinifera cultivars with different pedigrees

Plant Pathology

vol.68,no.6,page.1079-1087

E. Deyetta, J. Pouzouletb, J.-I. Yang, V. E. Ashworth, C. Castrod, M. C. Roperd and P. E. Rolshausen

2019

First report of Barley yellow dwarf virus-PAV infecting oats (Avena sativa L.) in Taiwan

Plant Disease

vol.103,no.7

Yao, Shun-Min, Ting-Hsuan Hung, Yung-Fen Huang and JIUE-IN YANG

2017

Microbial Landscape of the Grapevine Endosphere in the Context of Pierce’s Disease

Phytobiomes

vol.1,no.3

Elizabeth Deyett, M. Caroline Roper, Paul Ruegger, Jiue-In Yang, James Borneman, Philippe E. Rolshausen

2014

PRISE2: Software for designing sequence-selective PCR primers and probes

BMC Bioinformatics

vol.15,no.1

Huang, Y.-T. and Yang, J.-I. and Chrobak, M. and Borneman, J.

2013

Intestinal bacteria modify lymphoma incidence and latency by affecting systemic inflammatory state, oxidative stress, and leukocyte genotoxicity

Cancer Research

vol.73,no.14,page.4222-4232

Yamamoto, M.L. and Maier, I. and Dang, A.T. and Berry, D. and Liu, J. and Ruegger, P.M. and Yang, J.-I. and Soto, P.A. and Presley, L.L. and Reliene, R. and Westbrook, A.M. and Wei, B. and Loy, A. and Chang, C. and Braun, J. and Borneman, J. and Schiestl, R.H.

2012

Population dynamics of dactylella oviparasitica and heterodera schachtii: Toward a decision model for sugar beet planting

Journal of Nematology

vol.44,no.3,page.237-244

Yang, J.-I. and Benecke, S. and Jeske, D.R. and Rocha, F.S. and Becker, J.S. and Timper, P. and Becker, J.O. and Borneman, J.

2012

Correlations between Root-Associated Microorganisms and Peach Replant Disease Symptoms in a California Soil

PLoS ONE

vol.7,no.10

Yang, J.-i. and Ruegger, P.M. and McKenry, M.V. and Becker, J.O. and Borneman, J.

2012

Biocontrol efficacy among strains of pochonia chlamydosporia obtained from a root-knot nematode suppressive soil

Journal of Nematology

vol.44,no.1,page.67-71

Yang, J.-I. and Loffredo, A. and Borneman, J. and Becker, J.O.

2009

Investigations into peach seedling stunting caused by a replant soil

FEMS Microbiology Ecology

vol.68,no.2,page.192-200

Bent, E. and Loffredo, A. and Yang, J.-I. and McKenry, M.V. and Becker, J.O. and Borneman, J.

Year Article
2018

A species-specific PCR assay for the newly observed root lesion nematode, Pratylenchus vulnus, in Taiwan

ICPP 2018

YU-po Lin and Jiue-in Yang

2018

The plant parasitic nematodes and bacterial community in strawberry farms

ISME17

Jia Jin Law and Jiue-in Yang

2017

The possibility of controlling nematode with plasma-activated water

The 7th international conference of clinical plant science.

Jian-Ren Lai, Cheng-Che Hsu and Jiue-In Yang

2017

Cross examination of plant parasitic nematode population and soil microbiome in Taiwan farms

3rd International Symposium on Nematodes as Environmental Bioindicators

JIA-JIN LAWand JIUE-IN YANG

2017

A loop-mediated isothermal amplification method for the rapid detection of Aphelenchoides besseyi on rice

3rd International Symposium on Nematodes as Environmental Bioindicators

GUAN-YI YUand JIUE-IN YANG

2017

Development of a sequence-specific PCR assay for burrowing nematode (Radopholus similis) detection.

2017 APS Annual Meeting

CHI-SHUEN CHANGand JIUE-IN YANG

2017

Development of rapid detection of Aphelenchoides spp. in rice and fern.

The 7th international conference of clinical plant science.

2016

The Influence of the endosphere microbiome on Pierce’s disease development in grapevine.

2016 IS-MPMI XVII Congress

M. ROPER , J. Yang , J. Borneman, P. Ruegger, P. Rolshausen

2016

The Influence of the Endophytic Grapevine Microbiome on Pierce’s Disease Development

Plant & Animal Genome Conference XXIV

Caroline Roper , James Borneman , Paul Ruegger , Jiue-In Yang , and Philippe Rolshausen

2016

Nematode population associating with ambrosia beetles in Taiwan

2016 XXV International Congress of Entomology

2015

Microbiome study of potato taste defect in coffee beans from Rwanda.

American Phytopathologucal Society annual meeting.

2015

Nematode and the associated biological control applications.

植保會刊

2014

Assessment of soils for the presence of the nematophagous fungus Dactylella oviparasitica by a PCR-based strategy

Journal of Nematology

vol.46,no.2,page.257-258

H Witte, J Yang, J Borneman, JS Becker, JO Becker

2014

Biological control of Pierce's Disease: Identification of the endophytic mycobiota inhabiting diseased and symptomless grapevines

Phytopathology

vol. 104 ,no.11,page.133

J Yang, C Roper, J Borneman, J Gloer, K Maloney, P Rolshausen

2011

Fungi and oomycetes associated with a peach replant problem

Phytopathology

vol.101,no.6,page.S197

J Yang, JO Becker, J Borneman

2010

Population dynamics of Dactylella oviparasitica in a Heterodera schachtii suppressive soil

Phytopathology

vol.100,no.6,page.S141

J Yang, JO Becker, J Borneman

2010

Identification of a Meloidogyne incognita-suppressive soil and its potentially causal agent

Journal of Nematology

vol.42 ,no.3,page.252

A Loffredo, J Yang, J Borneman, JO Becker

Year Article
2015

Population Dynamics of Dactylella oviparasitica and Heterodera schachtii.

2015年海峽兩岸植物病裡學術研討會

jiue-in Yang

2012

Investigations into Peach Replant Disease and Nematophagous Fungi

jiue-in yang

About Us

Research Focus

    Nematodes are the most abundant animals on earth. They play important roles on chemical element cycling in the ecological systems, and therefore could be used as bioindicators for environmental evaluations. Some nematodes are animal parasitic that cause disesaes on human and many animals. As in agricultural system, more than 4000 species of the nematodes are pathogen to field crops or forest plants. These plant parasitic nematodes are responsible for more than 100 billlion US dollars worth of the yield loss worldwide annually. Naturally, plant-parasitic nematodes are considered important microbes when it comes to phytopathology researches.

    While plant pathologists are tackling plant diseases, it is necessary to take all possible factors into full considerations for the best management solution. Such factors include environment, host plants, pathogen/ pest, time, and etc. With the application of research methodology of microbial ecology concept, plant pathologists can study the microbiome in each environment with proper technique, reveal the interactions among the microbial populations, the plant and other related species, and finally, put the informative knowledge into agricultural management strategy development.

    With the passion of nematodes and agriculture, and seeing the value of microbiology, the Nematology and Microbial Ecology Laboratory was established in 2015 by Dr. Jiue-in Yang. We study the interaction among plant parasitic nematodes, plants and other microbes. We are interested in 1) The microbiome associated with plant nematodes, host plant, and the surrounding rhizosphere, 2) Nematode management strategy development, 3) The nematode pathogenic behaviors and the mechanisms behind. 

Previous graduates and thier thesis title are listed below:

  • Guan-Yi Yu (2018): Development and Application of a Rapid Detection Assay of White-tip Disease and Bakanae Disease on Rice.
  • Chih-shun Chang (2018): Phoretic nematodes population of scolytids in Taiwan. 
  • Yu-Po Lin (2019): The identification, detection assay development and population dynamic study of Pratylenchus vulnus
  • Jia-jin Law (2019): Effects of ascarosides and environmental factors on Aphelenchoides besseyi
  • Jian-ren Lai (2019): Development and application of the plasma activated water management system for root-knot nematodes
  • Wan-chun Lee (2020): The roles of neuropeptide genes flp16 and flp18 in strawberry root lesion nematode pathogenicity
  • Meng-shan Hsieh (2020): Effects of nickel and chromium on microbial communities and root-knot nematode in seepentine soil 

Currently, we are also working on projects with trans-displenary collaborations. Positsion open: PhD student, master student. 


Position Avalible

WE ARE HIRING! 

Postdoct and research assistant positions available. 


News